ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 417.00 33.12 2.19 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 24.00 1.03 0.13 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 158.00 0.62 0.83 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 433.00 1.27 2.28 45.87 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 1372.00 4.02 7.22 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 691.00 2.03 3.64 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 533.00 1.56 2.81 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1082.00 3.17 5.70 90.02 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 284.00 0.83 1.49 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 868.00 5.51 4.57 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 3703.00 23.49 19.49 33.72 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 566.00 3.65 2.98 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 164.00 0.38 0.86 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 59.00 0.13 0.31 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 235.00 0.54 1.24 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 35544.00 81.28 187.09 93.08 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 202.00 0.46 1.06 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 445.00 2.94 2.34 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 19516.00 61.47 102.73 95.0 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 63.00 0.44 0.33 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 170.00 5.05 0.89 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 291.00 8.65 1.53 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 878.00 26.09 4.62 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 221.00 6.57 1.16 71.29 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 130.00 0.00 0.68 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA transverse colon (Tissue)