ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 4971.00 52.34 26.17 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 7.00 1.61 0.04 33.33 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 14.00 3.21 0.07 66.67 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 295.00 6.35 1.55 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 15.00 0.32 0.08 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 61355.00 97.84 322.95 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 298.00 56.55 1.57 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1115.00 65.63 5.87 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 102.00 0.40 0.54 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 398.00 1.57 2.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 83.00 0.33 0.44 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 2542.00 10.00 13.38 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 60.00 0.24 0.32 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 188.00 0.74 0.99 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 3859.00 0.07 20.31 96.04 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 6401.00 0.11 33.69 67.39 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 6947.00 0.12 36.57 73.06 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1481.00 24.55 7.80 73.54 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4370.00 93.72 23.00 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 716.00 36.79 3.77 76.5 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 603.00 96.17 3.17 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 148.00 0.07 0.78 82.68 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 31.00 0.02 0.16 17.32 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 165165.00 82.34 869.38 96.55 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 9636.59 47.43 50.72 57.94 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA transverse colon (Tissue)