ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 886.00 4.36 4.66 67.89 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 7888.70 38.83 41.52 45.95 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 679686.00 95.82 3577.65 99.17 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 509.00 13.82 2.68 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 7278.00 46.19 38.31 81.38 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 39.00 0.01 0.21 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 252.00 0.02 1.33 53.73 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 624.00 25.54 3.28 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 72.00 1.58 0.38 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 584986.00 99.04 3079.18 99.85 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 2122.00 1.12 11.17 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 100096.00 52.79 526.87 84.36 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 192.00 39.67 1.01 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 30.00 0.35 0.16 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 297.00 10.55 1.56 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 88993.00 98.92 468.43 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 3632.00 97.06 19.12 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 10067.00 41.37 52.99 95.75 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 216.00 0.89 1.14 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 29.00 0.00 0.15 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2097.00 37.91 11.04 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 224.00 1.83 1.18 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 161.00 6.10 0.85 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 443.00 16.79 2.33 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 261.00 9.89 1.37 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)