ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 39.00 49.37 0.21 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 395.00 6.53 2.08 88.57 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 127.00 2.10 0.67 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 1972.00 32.61 10.38 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 4326.00 49.13 22.77 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 610.00 0.05 3.21 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2793.00 0.21 14.70 91.1 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 129.00 0.01 0.68 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 336.00 0.03 1.77 89.12 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 96813.00 7.43 509.59 31.01 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 549.00 0.04 2.89 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 86.00 0.01 0.45 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 5190.00 86.62 27.32 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 144.00 0.00 0.76 97.3 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 3647.00 33.40 19.20 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 2674.00 24.49 14.08 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 790.00 7.15 4.16 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 109.00 0.72 0.57 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 120.00 0.00 0.63 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 618.00 0.01 3.25 7.68 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 4927.00 28.66 25.93 37.9 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 8074.00 46.96 42.50 78.0 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 84.00 1.47 0.44 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1252.00 0.10 6.59 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1042213.00 80.07 5485.88 93.71 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA transverse colon (Tissue)