ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 24.00 0.21 0.13 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 432.55 3.84 2.28 62.42 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 2286.00 20.29 12.03 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 567.00 5.03 2.98 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 84.00 0.75 0.44 100.0 U2.3-201 snRNA transverse colon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 340.00 4.42 1.79 100.0 U2.6-201 snRNA transverse colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 61.00 0.17 0.32 15.02 ENST00000619323 lncRNA transverse colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 34020.00 96.09 179.07 98.27 ENST00000619323 lncRNA transverse colon (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 209.00 18.68 1.10 100.0 SCARNA4-202 scaRNA transverse colon (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 288.00 31.89 1.52 100.0 ENST00000625572 miRNA transverse colon (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 2945.00 91.52 15.50 100.0 ENST00000628177 snoRNA transverse colon (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1491.00 85.30 7.85 100.0 ENST00000630615 snoRNA transverse colon (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 330.00 43.65 1.74 100.0 DMRT2-209 protein coding transverse colon (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 152.00 20.11 0.80 100.0 DMRT2-209 protein coding transverse colon (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 953.00 63.75 5.02 100.0 SNORD98-201 snoRNA transverse colon (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 240.00 16.05 1.26 100.0 SNORD98-201 snoRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 20311.72 49.61 106.91 55.32 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 45.87 0.11 0.24 40.59 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 6.00 0.01 0.03 100.0 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 58.79 0.14 0.31 52.02 MIR106AHG-201 lncRNA transverse colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 129.00 46.07 0.68 100.0 MEG8-222 lncRNA transverse colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 20.00 7.14 0.11 100.0 MEG8-222 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 1822.00 35.45 9.59 96.56 SNHG14-224 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 236.00 4.59 1.24 85.51 SNHG14-224 lncRNA transverse colon (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 965.00 18.77 5.08 100.0 SNHG14-224 lncRNA transverse colon (Tissue)