ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 436.00 14.23 3.23 79.85 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 303.00 0.05 2.24 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 981.00 45.82 7.26 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 19.00 2.41 0.14 63.33 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 11.00 1.39 0.08 36.67 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 982.00 12.66 7.26 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 54.00 0.70 0.40 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 14905.00 95.31 110.26 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 717.00 68.74 5.30 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 439.00 26.85 3.25 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 477.00 0.82 3.53 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 63.00 0.11 0.47 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 139.00 0.24 1.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 2231.00 3.83 16.50 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 408.00 0.70 3.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 175.00 0.30 1.29 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 309.00 0.05 2.29 71.03 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 468.00 0.08 3.46 60.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 7217.00 1.28 53.39 95.07 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 14357.00 50.44 106.20 84.07 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2909.00 97.62 21.52 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 4624.00 41.69 34.21 77.38 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 153.00 95.03 1.13 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 363.00 1.31 2.69 92.84 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 28.00 0.10 0.21 7.16 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)