ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 492.00 0.10 3.64 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 339126.00 71.70 2508.65 94.32 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 1055.00 22.16 7.80 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 36.00 1.64 0.27 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 515.00 0.88 3.81 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 100.00 0.39 0.74 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 272.00 1.06 2.01 36.46 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 117.00 0.46 0.87 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 187.00 0.73 1.38 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1270.00 4.95 9.39 89.25 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 329.00 1.28 2.43 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 4256.00 25.19 31.48 58.33 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 4036.00 23.89 29.86 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1867.00 12.99 13.81 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 85.00 0.24 0.63 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 162.00 0.46 1.20 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 54.00 0.15 0.40 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 159.00 0.45 1.18 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 30179.00 86.27 223.25 96.34 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1215.00 9.20 8.99 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 16099.00 70.01 119.09 92.75 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 282.00 2.42 2.09 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 589.00 19.23 4.36 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 349.00 11.39 2.58 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 370.00 12.08 2.74 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)