ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 18672.00 67.18 138.12 88.38 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 4400.74 50.24 32.55 78.15 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 1611.01 18.39 11.92 29.96 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 840.00 9.59 6.21 89.27 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 83385.00 94.12 616.83 96.98 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 278.00 5.36 2.06 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 3040.00 18.04 22.49 62.26 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 42.00 0.03 0.31 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 309.00 0.07 2.29 82.84 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 13833.00 87.61 102.33 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 281.00 4.23 2.08 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 131815.00 97.94 975.09 99.82 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 66.00 0.26 0.49 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 11451.00 45.31 84.71 83.9 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 60.00 24.39 0.44 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 1630.00 41.30 12.06 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 48.00 4.27 0.36 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 26767.00 97.98 198.01 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 812.00 96.44 6.01 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 32793.00 57.26 242.58 93.75 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 435.00 0.76 3.22 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 13.00 0.01 0.10 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2432.00 41.79 17.99 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 373.00 5.19 2.76 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 43.00 1.72 0.32 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA upper lobe of left lung (Tissue)