ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 40.00 48.78 0.30 100.0 MEG9-206 lncRNA upper lobe of left lung (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 1248.00 11.75 9.23 100.0 DNAJC5-203 nonsense mediated decay upper lobe of left lung (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 2256.00 35.06 16.69 100.0 ENST00000707189 TEC upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 7.00 0.01 0.05 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 34427.14 30.19 254.67 34.05 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 126.00 0.11 0.93 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 76515.35 67.09 566.01 71.71 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 1218.00 1.07 9.01 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 97.00 0.09 0.72 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 86.00 0.08 0.64 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 116.00 0.10 0.86 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 7087.00 3.98 52.43 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 416.00 0.23 3.08 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 25.00 0.01 0.18 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 5902.00 3.31 43.66 84.97 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 162269.00 91.06 1200.37 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 27702.00 90.14 204.92 98.28 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1352.00 4.40 10.00 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 11.00 0.04 0.08 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 9.00 0.03 0.07 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 1075.00 84.25 7.95 100.0 B4GALT1-203 nonsense mediated decay upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 643.00 2.62 4.76 100.0 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 2945.00 11.99 21.79 81.9 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 692.00 2.82 5.12 100.0 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 592.00 34.08 4.38 100.0 MIR34BHG-202 lncRNA upper lobe of left lung (Tissue)