ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 9334.00 66.52 69.05 73.48 THBS3-AS1-228 lncRNA upper lobe of left lung (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 6294.00 74.23 46.56 100.0 MIR200CHG-202 lncRNA upper lobe of left lung (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 652.00 7.69 4.82 100.0 MIR200CHG-202 lncRNA upper lobe of left lung (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2227.00 36.25 16.47 100.0 SNHG16-266 lncRNA upper lobe of left lung (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 288.00 4.69 2.13 100.0 SNHG16-266 lncRNA upper lobe of left lung (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 663.00 10.79 4.90 100.0 SNHG16-266 lncRNA upper lobe of left lung (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 6.00 100.00 0.04 100.0 MEG8-261 lncRNA upper lobe of left lung (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 146.00 33.80 1.08 100.0 NR2F2-AS1-327 lncRNA upper lobe of left lung (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 557.00 2.43 4.12 46.49 ENST00000747675 lncRNA upper lobe of left lung (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 17247.00 75.33 127.58 100.0 ENST00000747675 lncRNA upper lobe of left lung (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 303.00 1.32 2.24 35.23 ENST00000747675 lncRNA upper lobe of left lung (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 338.00 1.48 2.50 37.77 ENST00000747675 lncRNA upper lobe of left lung (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 676.00 2.95 5.00 100.0 ENST00000747675 lncRNA upper lobe of left lung (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 32700.00 74.30 241.89 91.81 SNHG26-250 lncRNA upper lobe of left lung (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 3224.00 7.33 23.85 100.0 SNHG26-250 lncRNA upper lobe of left lung (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 215.00 17.96 1.59 100.0 LINC02422-207 lncRNA upper lobe of left lung (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 210.00 10.67 1.55 100.0 ENST00000753088 lncRNA upper lobe of left lung (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 283.00 14.37 2.09 100.0 ENST00000753088 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 795.89 4.74 5.89 27.68 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1012.00 6.02 7.49 100.0 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 389.00 2.32 2.88 100.0 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 108.00 0.64 0.80 100.0 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1949.25 11.60 14.42 33.81 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 4345.25 25.87 32.14 68.6 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 239.09 1.42 1.77 33.25 ENST00000756336 lncRNA upper lobe of left lung (Tissue)