ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 162.00 0.22 1.20 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 5100.00 7.00 37.73 56.69 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 38.00 0.05 0.28 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 110.00 0.15 0.81 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 400.00 0.55 2.96 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 20499.00 28.15 151.64 67.85 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 2364.00 3.25 17.49 100.0 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 27271.00 37.45 201.73 81.58 ENST00000651540 lncRNA upper lobe of left lung (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 16394.00 2.35 121.27 100.0 MIRLET7A1HG-203 lncRNA upper lobe of left lung (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 241.00 94.14 1.78 100.0 MEG8-225 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 2216.00 25.72 16.39 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 2785.00 32.33 20.60 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1962.00 22.77 14.51 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 7.00 0.08 0.05 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 6.00 0.07 0.04 100.0 SNHG29-232 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 328.00 7.91 2.43 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 93.00 2.24 0.69 100.0 SNHG14-234 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 344.00 1.79 2.54 100.0 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 14587.00 75.96 107.91 94.65 ENST00000655317 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 825.00 2.00 6.10 96.6 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 37291.00 90.27 275.86 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 333.00 0.81 2.46 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 1162.00 92.37 8.60 100.0 MEG8-228 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 1469.00 20.51 10.87 100.0 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 997.00 13.92 7.38 95.32 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)