ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 2311.00 58.94 17.10 83.58 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 728.00 18.57 5.39 100.0 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 34.00 60.71 0.25 89.47 MIR9-2HG-225 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 195.00 54.32 1.44 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 31.00 8.64 0.23 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 125.00 34.44 0.92 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 104.00 28.65 0.77 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 11.00 35.48 0.08 100.0 MEG8-240 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 16.00 25.81 0.12 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 5.00 8.06 0.04 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 127.00 6.75 0.94 100.0 ENST00000666735 lncRNA upper lobe of left lung (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 37.00 1.97 0.27 100.0 ENST00000666735 lncRNA upper lobe of left lung (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 157.00 62.30 1.16 100.0 MEG8-242 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 23.00 0.24 0.17 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 83.00 0.85 0.61 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 9501.00 97.41 70.28 99.81 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1433.00 0.23 10.60 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 11094.00 1.77 82.07 98.51 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 2814.08 0.45 20.82 65.49 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1715.00 0.27 12.69 82.77 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 177767.00 28.29 1315.01 99.58 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1997.00 0.32 14.77 80.75 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 119675.00 19.05 885.28 99.14 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 17336.00 2.76 128.24 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 91103.00 14.50 673.92 99.79 SNHG1-248 lncRNA upper lobe of left lung (Tissue)