ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 38.00 6.48 0.18 100.0 RPL13A-212 retained intron sigmoid colon (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 5.00 0.85 0.02 100.0 RPL13A-212 retained intron sigmoid colon (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 34.00 15.25 0.16 100.0 RPL7A-207 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 43.00 19.28 0.20 100.0 RPL7A-207 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 122.00 86.52 0.57 100.0 RGS11-208 retained intron sigmoid colon (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 659.00 63.55 3.07 84.7 NOP56-217 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 283.00 11.88 1.32 100.0 RABGGTB-213 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 38.00 1.60 0.18 46.91 RABGGTB-213 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 127.00 5.33 0.59 100.0 RABGGTB-213 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 906.00 38.04 4.22 87.45 RABGGTB-213 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 43.00 1.81 0.20 53.09 RABGGTB-213 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 67.00 2.81 0.31 100.0 RABGGTB-213 protein coding CDS not defined sigmoid colon (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 571.00 84.34 2.66 100.0 GNL3-211 retained intron sigmoid colon (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 54.00 7.98 0.25 100.0 GNL3-211 retained intron sigmoid colon (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 21.00 15.33 0.10 100.0 RPL5-205 retained intron sigmoid colon (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 16.00 0.45 0.07 100.0 ZBED9-AS1-201 lncRNA sigmoid colon (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 384.00 87.47 1.79 100.0 RPS3A-206 retained intron sigmoid colon (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 1893.00 98.08 8.82 100.0 COX7C-203 protein coding sigmoid colon (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 553.45 17.78 2.58 37.42 RACK1-229 protein coding sigmoid colon (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 1484.99 47.72 6.92 75.76 RACK1-229 protein coding sigmoid colon (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 522.00 16.77 2.43 98.68 RACK1-229 protein coding sigmoid colon (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 230.00 7.39 1.07 100.0 RACK1-229 protein coding sigmoid colon (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 30.00 9.15 0.14 100.0 RACK1-230 retained intron sigmoid colon (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 305.00 3.92 1.42 100.0 RNA5SP486-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 185.00 87.26 0.86 100.0 SCARNA5-201 scaRNA sigmoid colon (Tissue)