ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 35.00 22.88 0.16 100.0 HCN2-201 protein coding sigmoid colon (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 117.00 24.17 0.54 100.0 ATP5MC3-201 protein coding sigmoid colon (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 170.00 39.81 0.79 100.0 CDC25A-201 protein coding sigmoid colon (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 564.00 81.03 2.63 100.0 RUNX3-201 protein coding sigmoid colon (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 140.00 53.64 0.65 100.0 BLOC1S4-201 protein coding sigmoid colon (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 211.00 28.59 0.98 100.0 ATAD5-201 protein coding sigmoid colon (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 68.00 26.56 0.32 100.0 SLITRK5-201 protein coding sigmoid colon (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 466.00 37.10 2.17 100.0 HASPIN-201 protein coding sigmoid colon (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 164.00 95.91 0.76 100.0 ATG101-201 protein coding sigmoid colon (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 7.00 46.67 0.03 100.0 PRICKLE1-201 protein coding sigmoid colon (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 646.00 97.88 3.01 99.08 MIR133A2-201 miRNA sigmoid colon (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 2876.00 7.00 13.40 81.5 MIRLET7BHG-201 lncRNA sigmoid colon (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 35109.00 85.48 163.52 96.89 MIRLET7BHG-201 lncRNA sigmoid colon (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 2.00 1.57 0.01 66.67 MIR375-201 miRNA sigmoid colon (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 121.00 95.28 0.56 100.0 MIR375-201 miRNA sigmoid colon (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 576.00 39.78 2.68 100.0 MIR30E-201 miRNA sigmoid colon (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 784.00 54.14 3.65 100.0 MIR30E-201 miRNA sigmoid colon (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 80.00 40.40 0.37 100.0 MIR29A-201 miRNA sigmoid colon (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 25.00 100.00 0.12 100.0 MIR345-201 miRNA sigmoid colon (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 683.00 97.43 3.18 100.0 MIR16-2-201 miRNA sigmoid colon (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 4.00 1.27 0.02 100.0 MIR340-201 miRNA sigmoid colon (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 302.00 96.18 1.41 100.0 MIR340-201 miRNA sigmoid colon (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 135.00 61.93 0.63 100.0 MIR107-201 miRNA sigmoid colon (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 53.00 96.36 0.25 98.15 MIR381-201 miRNA sigmoid colon (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 810.00 81.74 3.77 90.3 MIR103A2-201 miRNA sigmoid colon (Tissue)