ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 13253.00 80.34 77.63 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 6479.00 94.46 37.95 98.55 SNORD114-20-201 snoRNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 81.00 13.48 0.47 75.7 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 5.00 0.83 0.03 100.0 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 119.00 19.80 0.70 82.07 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 112.00 18.64 0.66 76.71 7SK.1-201 misc RNA sigmoid colon (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 670.00 69.14 3.92 100.0 RNA5SP77-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 7519.00 54.53 44.04 100.0 SNORD114-22-201 snoRNA sigmoid colon (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 5832.00 42.29 34.16 97.49 SNORD114-22-201 snoRNA sigmoid colon (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 425.00 4.50 2.49 100.0 SNORD6-201 snoRNA sigmoid colon (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 8099.00 85.77 47.44 100.0 SNORD6-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 4567.00 19.93 26.75 99.2 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 722.00 3.15 4.23 100.0 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 64.00 0.28 0.37 100.0 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1479.00 6.45 8.66 100.0 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 4151.00 18.12 24.31 88.04 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 3222.14 14.06 18.87 33.06 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6286.17 27.43 36.82 64.51 SNORD82-201 snoRNA sigmoid colon (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 3695.00 94.89 21.64 97.24 MIR146B-201 miRNA sigmoid colon (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 154.00 67.54 0.90 100.0 SNHG20-201 lncRNA sigmoid colon (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 4.00 1.51 0.02 100.0 ATP5MK-205 protein coding sigmoid colon (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 87.00 32.83 0.51 100.0 ATP5MK-205 protein coding sigmoid colon (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 8.00 7.62 0.05 100.0 LINC01556-201 lncRNA sigmoid colon (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 620.00 47.44 3.63 100.0 ATAD3A-202 protein coding sigmoid colon (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 8.00 6.40 0.05 18.6 TMC5-202 protein coding sigmoid colon (Tissue)