ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 1039.00 97.65 6.09 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 15325.00 40.97 89.76 96.47 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 373.00 1.00 2.18 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 86.00 0.06 0.50 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 2159.00 66.84 12.65 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 130.00 2.48 0.76 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 26.00 1.28 0.15 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 223.00 10.96 1.31 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 112.00 5.51 0.66 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA sigmoid colon (Tissue)