ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 16.00 72.73 0.09 100.0 ZMYM2-203 protein coding sigmoid colon (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 45.00 1.03 0.26 100.0 RNVU1-7-201 snRNA sigmoid colon (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 424.00 68.39 2.48 100.0 Y_RNA.389-201 misc RNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 92442.00 97.24 541.46 99.88 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 92.00 0.10 0.54 100.0 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 599.00 0.63 3.51 100.0 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 48027.00 97.64 281.31 100.0 SNORD37-201 snoRNA sigmoid colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 158243.00 97.60 926.88 100.0 SNORD59A-201 snoRNA sigmoid colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 273.00 55.83 1.60 100.0 SNORA7B-201 snoRNA sigmoid colon (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 19.00 3.75 0.11 100.0 Y_RNA.555-201 misc RNA sigmoid colon (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 7944.00 93.50 46.53 94.98 MIR25-201 miRNA sigmoid colon (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 30069.00 95.18 176.12 98.96 MIR99B-201 miRNA sigmoid colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 21762.00 55.23 127.47 83.64 MIR23B-201 miRNA sigmoid colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 16672.00 42.31 97.65 85.08 MIR23B-201 miRNA sigmoid colon (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 10.00 12.05 0.06 100.0 MIR203A-201 miRNA sigmoid colon (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 8101.00 87.19 47.45 90.52 MIR199B-201 miRNA sigmoid colon (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 88.00 0.95 0.52 100.0 MIR199B-201 miRNA sigmoid colon (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1827.00 95.80 10.70 100.0 MIR30B-201 miRNA sigmoid colon (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1388.00 95.99 8.13 100.0 MIR181D-201 miRNA sigmoid colon (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 47.00 100.00 0.28 100.0 MIR215-201 miRNA sigmoid colon (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 704.00 1.04 4.12 100.0 MIR181A2-201 miRNA sigmoid colon (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 50957.00 99.27 298.47 99.68 MIR191-201 miRNA sigmoid colon (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 66.00 85.71 0.39 90.41 MIR149-201 miRNA sigmoid colon (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 2337.00 93.00 13.69 99.11 MIR181C-201 miRNA sigmoid colon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 78.00 3.10 0.46 100.0 MIR181C-201 miRNA sigmoid colon (Tissue)