ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 159.08 4.73 0.93 16.09 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 4674.05 4.38 27.38 38.36 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 1484.42 1.39 8.69 68.75 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 403.00 0.38 2.36 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1522.00 1.42 8.91 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 312.00 0.29 1.83 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1143.72 1.07 6.70 50.34 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1011.00 0.95 5.92 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 2723.00 2.55 15.95 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 254.00 0.24 1.49 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1692.00 55.80 9.91 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 947.00 31.23 5.55 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 5584.00 42.01 32.71 100.0 Y_RNA.234-201 misc RNA sigmoid colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 37.00 1.65 0.22 100.0 RNA5SP141-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 150.00 56.39 0.88 100.0 SNORD114-15-201 snoRNA sigmoid colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 36.00 17.31 0.21 100.0 ENST00000364722 snoRNA sigmoid colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 180.00 50.00 1.05 100.0 SNORD113-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3177.00 72.25 18.61 100.0 SNORD52-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 441.00 9.63 2.58 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 3827.00 83.56 22.42 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 35.00 0.76 0.21 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 29.00 2.45 0.17 100.0 RNA5SP298-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 682.00 86.55 3.99 100.0 SNORD113-9-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 354.00 2.15 2.07 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 13253.00 80.34 77.63 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)