ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2942.00 23.10 17.23 72.82 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 22.00 0.17 0.13 100.0 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 332.54 2.61 1.95 57.53 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1290.00 10.13 7.56 74.44 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1234.00 9.69 7.23 52.49 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1553.00 12.19 9.10 67.7 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 772.00 89.35 4.52 100.0 SNORD114-14-201 snoRNA sigmoid colon (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1188.00 5.51 6.96 100.0 SNORD104-201 snoRNA sigmoid colon (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 45.00 0.21 0.26 100.0 SNORD104-201 snoRNA sigmoid colon (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 60262.00 72.51 352.97 82.0 RNA5SP358-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 48.00 1.59 0.28 62.34 RNA5SP145-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 6.00 75.00 0.04 100.0 Y_RNA.105-201 misc RNA sigmoid colon (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 24.00 3.12 0.14 100.0 RNY4P9-201 misc RNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 3109.00 42.15 18.21 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 755.00 10.24 4.42 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 42.00 0.57 0.25 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 92.00 4.96 0.54 95.83 RNY4P27-201 misc RNA sigmoid colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 15.00 0.81 0.09 78.95 RNY4P27-201 misc RNA sigmoid colon (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 344.00 15.46 2.01 100.0 Y_RNA.136-201 misc RNA sigmoid colon (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 4172.00 94.41 24.44 98.61 SNORD114-25-201 snoRNA sigmoid colon (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1710.00 95.42 10.02 100.0 SNORD113-7-201 snoRNA sigmoid colon (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 128.00 41.03 0.75 100.0 Y_RNA.181-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1187.28 35.31 6.95 81.21 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 159.08 4.73 0.93 16.09 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 85.00 2.53 0.50 100.0 RNY1-201 misc RNA sigmoid colon (Tissue)