ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 118.00 8.41 0.69 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 159.00 11.58 0.93 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 33.00 0.49 0.19 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 72.00 0.03 0.42 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 57.00 0.03 0.33 11.66 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1348.00 31.78 7.90 70.61 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 940.00 22.16 5.51 41.08 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 182.00 5.16 1.07 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 4040.00 1.37 23.66 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 168947.00 57.45 989.58 92.67 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 90.00 16.89 0.53 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 12.00 0.80 0.07 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 109.00 0.27 0.64 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 415.00 3.91 2.43 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 175.00 1.65 1.03 19.4 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 49.00 0.46 0.29 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 244.00 2.30 1.43 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 1837.00 17.29 10.76 95.43 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 152.00 1.43 0.89 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1796.00 21.66 10.52 52.47 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 2046.00 24.68 11.98 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 985.00 14.09 5.77 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 3496.00 46.44 20.48 92.44 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 155.00 2.06 0.91 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 412.00 5.47 2.41 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)