ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 36.00 0.48 0.21 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 309.00 4.10 1.81 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 877.00 13.04 5.14 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 1753.00 24.20 10.27 86.14 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 160.00 2.86 0.94 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 189.00 9.32 1.11 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 48.00 2.37 0.28 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 316.00 15.59 1.85 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 39.00 1.92 0.23 40.62 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 948.00 0.33 5.55 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 348.00 28.38 2.04 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 4.00 3.23 0.02 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 539.00 7.61 3.16 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 22.00 0.31 0.13 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 3019.00 90.93 17.68 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 430.00 68.47 2.52 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 125.00 24.08 0.73 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1469.00 3.59 8.60 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 51.00 0.12 0.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 246.00 0.60 1.44 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 322.00 0.79 1.89 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 246.00 0.60 1.44 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 88.00 0.22 0.52 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 157.00 0.06 0.92 67.09 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 209.00 0.07 1.22 59.54 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)