ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 9440.00 71.29 55.29 76.17 ENST00000839036 lncRNA sigmoid colon (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 45.00 12.33 0.26 100.0 ENST00000849527 lncRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 24681.00 88.69 144.56 95.79 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 48.00 0.17 0.28 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 167.00 0.11 0.98 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1344.00 62.92 7.87 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 165.00 7.72 0.97 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 125.00 18.44 0.73 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 27.00 0.49 0.16 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 480.00 37.44 2.81 63.24 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 427.00 0.28 2.50 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 3.00 10.34 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 268.00 9.80 1.57 89.63 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 32.00 1.17 0.19 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 615.00 22.49 3.60 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 3629.00 67.18 21.26 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 268.00 0.09 1.57 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2804.00 0.95 16.42 87.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 140.00 0.05 0.82 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 369.00 0.13 2.16 87.03 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 65101.00 22.11 381.32 49.9 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 61.00 0.02 0.36 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 147.00 64.76 0.86 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 167.00 0.07 0.98 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 386.00 27.51 2.26 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA sigmoid colon (Tissue)