ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 5.00 0.02 0.03 100.0 RNA5-8SN2-201 rRNA sigmoid colon (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 8612.38 38.46 50.45 51.9 RNA5-8SN2-201 rRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 366.00 4.15 2.14 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 17.00 0.19 0.10 13.39 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 8.00 0.09 0.05 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 177.00 2.01 1.04 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 346.00 3.92 2.03 100.0 U2.3-201 snRNA sigmoid colon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 489.00 5.83 2.86 100.0 U2.6-201 snRNA sigmoid colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 145.00 0.47 0.85 33.41 ENST00000619323 lncRNA sigmoid colon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 30118.00 96.83 176.41 98.47 ENST00000619323 lncRNA sigmoid colon (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 232.00 28.82 1.36 100.0 SCARNA4-202 scaRNA sigmoid colon (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1321.00 85.01 7.74 100.0 ENST00000625572 miRNA sigmoid colon (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 585.00 93.00 3.43 100.0 ENST00000630615 snoRNA sigmoid colon (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 399.00 43.61 2.34 100.0 DMRT2-209 protein coding sigmoid colon (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 227.00 24.81 1.33 100.0 DMRT2-209 protein coding sigmoid colon (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 566.00 38.53 3.32 100.0 SNORD98-201 snoRNA sigmoid colon (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 618.00 42.07 3.62 100.0 SNORD98-201 snoRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 39909.88 65.34 233.77 67.77 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 102.13 0.17 0.60 32.02 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 14.00 0.02 0.08 100.0 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 189.14 0.31 1.11 59.29 MIR106AHG-201 lncRNA sigmoid colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 182.00 40.18 1.07 100.0 MEG8-222 lncRNA sigmoid colon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 157.00 34.66 0.92 100.0 MEG8-222 lncRNA sigmoid colon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 185.00 3.69 1.08 100.0 SNHG14-224 lncRNA sigmoid colon (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1325.00 26.42 7.76 85.76 SNHG14-224 lncRNA sigmoid colon (Tissue)