ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 35.00 53.03 0.68 100.0 MIR145-201 miRNA GM23248 (Cell line)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 23.00 34.85 0.45 100.0 MIR145-201 miRNA GM23248 (Cell line)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 1248.00 96.30 24.39 97.35 MIR186-201 miRNA GM23248 (Cell line)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 1.00 100.00 0.02 100.0 MIR200B-201 miRNA GM23248 (Cell line)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 24.00 53.33 0.47 100.0 MIR218-1-201 miRNA GM23248 (Cell line)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 1208.00 92.50 23.61 96.25 MIR181B2-201 miRNA GM23248 (Cell line)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 50.00 0.02 100.0 MIR495-201 miRNA GM23248 (Cell line)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 60960.00 85.32 1191.37 85.87 MIR10B-201 miRNA GM23248 (Cell line)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 27.00 27.00 0.53 100.0 MIR130B-201 miRNA GM23248 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 41.87 41.87 0.82 63.44 MIR130B-201 miRNA GM23248 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 29.69 29.69 0.58 42.41 MIR130B-201 miRNA GM23248 (Cell line)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 379.00 4.31 7.41 100.0 MIR199A1-201 miRNA GM23248 (Cell line)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 31.00 70.45 0.61 100.0 MIR487B-201 miRNA GM23248 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 43.04 22.30 0.84 32.6 MIR93-201 miRNA GM23248 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 128.57 66.62 2.51 73.05 MIR93-201 miRNA GM23248 (Cell line)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 32.00 82.05 0.63 91.43 MIR532-201 miRNA GM23248 (Cell line)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 27.00 90.00 0.53 100.0 MIR15B-201 miRNA GM23248 (Cell line)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 20.00 51.28 0.39 100.0 MIR542-201 miRNA GM23248 (Cell line)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 3.00 6.12 0.06 100.0 MIR500A-201 miRNA GM23248 (Cell line)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 36.00 73.47 0.70 100.0 MIR500A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 1701.00 91.55 33.24 99.13 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 7.00 0.38 0.14 100.0 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 70.00 3.77 1.37 100.0 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 46.00 2.48 0.90 75.41 MIR30A-201 miRNA GM23248 (Cell line)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 117.00 0.77 2.29 100.0 MIR27B-201 miRNA GM23248 (Cell line)