ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 35760.00 96.44 698.87 100.0 SNORD37-201 snoRNA GM23248 (Cell line)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 24412.00 91.45 477.10 98.2 SNORD59A-201 snoRNA GM23248 (Cell line)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 5.00 13.51 0.10 100.0 SNORA7B-201 snoRNA GM23248 (Cell line)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 1.00 50.00 0.02 100.0 SNORD14D-201 snoRNA GM23248 (Cell line)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 1.00 11.11 0.02 100.0 Y_RNA.555-201 misc RNA GM23248 (Cell line)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 447.00 93.71 8.74 94.7 MIR25-201 miRNA GM23248 (Cell line)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 1027.00 92.86 20.07 99.32 MIR99B-201 miRNA GM23248 (Cell line)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 472.00 77.63 9.22 94.4 MIR23B-201 miRNA GM23248 (Cell line)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 115.00 18.91 2.25 58.08 MIR23B-201 miRNA GM23248 (Cell line)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 714.00 7.85 13.95 100.0 MIR199B-201 miRNA GM23248 (Cell line)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 7526.00 82.70 147.08 91.86 MIR199B-201 miRNA GM23248 (Cell line)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 22.00 95.65 0.43 100.0 MIR30B-201 miRNA GM23248 (Cell line)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 65.00 87.84 1.27 100.0 MIR181D-201 miRNA GM23248 (Cell line)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 1.00 100.00 0.02 100.0 MIR215-201 miRNA GM23248 (Cell line)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 230.00 1.74 4.49 100.0 MIR181A2-201 miRNA GM23248 (Cell line)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 5772.00 99.43 112.80 99.84 MIR191-201 miRNA GM23248 (Cell line)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 2.00 50.00 0.04 50.0 MIR149-201 miRNA GM23248 (Cell line)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 134.00 69.43 2.62 89.33 MIR181C-201 miRNA GM23248 (Cell line)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 36.00 18.65 0.70 100.0 MIR181C-201 miRNA GM23248 (Cell line)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 2.00 100.00 0.04 100.0 MIR194-1-201 miRNA GM23248 (Cell line)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 44.00 89.80 0.86 91.67 MIR128-2-201 miRNA GM23248 (Cell line)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 529.00 93.13 10.34 95.49 MIR99A-201 miRNA GM23248 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 11.00 0.46 0.21 100.0 MIR28-201 miRNA GM23248 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 2074.00 87.03 40.53 93.42 MIR28-201 miRNA GM23248 (Cell line)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 116.00 4.87 2.27 91.34 MIR28-201 miRNA GM23248 (Cell line)