ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 65.00 1.09 1.27 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 26.00 0.24 0.51 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 267.00 73.35 5.22 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 33.00 4.95 0.64 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 16.00 3.61 0.31 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 108.00 24.38 2.11 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 93.00 20.99 1.82 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA GM23248 (Cell line)