ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 27.00 5.71 0.12 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 341.00 72.09 1.47 100.0 MIR500A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 677.00 0.54 2.91 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 21237.00 16.84 91.35 85.66 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 90564.00 71.80 389.55 96.22 MIR30A-201 miRNA stomach (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 8518.00 6.75 36.64 100.0 MIR30A-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 972.00 0.86 4.18 100.0 MIR27B-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 102878.00 91.41 442.52 94.47 MIR27B-201 miRNA stomach (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 149.00 91.98 0.64 100.0 MIR577-201 miRNA stomach (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 183.00 66.79 0.79 80.97 MIR654-201 miRNA stomach (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 1427.00 92.42 6.14 98.75 MIR204-201 miRNA stomach (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 2032.00 93.90 8.74 100.0 MIR152-201 miRNA stomach (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 1.00 33.33 0.00 100.0 MIR138-1-201 miRNA stomach (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 4755.00 90.23 20.45 100.0 MIR30C1-201 miRNA stomach (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 98.00 76.56 0.42 100.0 MIR660-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 6858.00 65.10 29.50 75.17 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 708.00 6.72 3.05 100.0 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 23.00 20.72 0.10 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 65.00 58.56 0.28 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 39676.71 28.16 170.67 31.71 MIR182-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 76264.92 54.13 328.05 58.74 MIR182-201 miRNA stomach (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 15323.00 86.30 65.91 90.32 MIR100-201 miRNA stomach (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 145.00 90.62 0.62 100.0 MIR301A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 8185.00 94.89 35.21 98.17 MIR130A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 356.00 4.13 1.53 37.39 MIR130A-201 miRNA stomach (Tissue)