ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 348.00 84.26 1.50 86.35 MIR128-2-201 miRNA stomach (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 2469.00 75.64 10.62 84.44 MIR99A-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1453.00 0.52 6.25 85.57 MIR28-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 251430.00 89.63 1081.50 92.54 MIR28-201 miRNA stomach (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 3459.00 1.23 14.88 100.0 MIR28-201 miRNA stomach (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 815.00 69.54 3.51 100.0 MIR183-201 miRNA stomach (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1003.00 2.82 4.31 100.0 MIR145-201 miRNA stomach (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 32111.00 90.29 138.12 100.0 MIR145-201 miRNA stomach (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 8409.00 97.72 36.17 98.82 MIR186-201 miRNA stomach (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 2089.00 69.01 8.99 100.0 MIR200B-201 miRNA stomach (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 67.00 28.88 0.29 100.0 MIR218-1-201 miRNA stomach (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 5463.00 90.33 23.50 95.29 MIR181B2-201 miRNA stomach (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 3.00 37.50 0.01 100.0 MIR495-201 miRNA stomach (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1297809.00 87.75 5582.39 88.29 MIR10B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 710.17 67.70 3.05 71.52 MIR130B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 14.00 1.33 0.06 100.0 MIR130B-201 miRNA stomach (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 106.42 10.14 0.46 36.57 MIR130B-201 miRNA stomach (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 585.00 7.34 2.52 100.0 MIR199A1-201 miRNA stomach (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 30.00 88.24 0.13 100.0 MIR487B-201 miRNA stomach (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 242.74 20.82 1.04 25.63 MIR93-201 miRNA stomach (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 832.92 71.43 3.58 74.23 MIR93-201 miRNA stomach (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 1805.00 76.55 7.76 82.38 MIR532-201 miRNA stomach (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 90.00 83.33 0.39 100.0 MIR15B-201 miRNA stomach (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 979.00 83.96 4.21 100.0 MIR150-201 miRNA stomach (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 25.00 67.57 0.11 100.0 MIR542-201 miRNA stomach (Tissue)