ENCFF583SZV
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | stomach (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR573RGL |
| Description: | Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 1531.00 | 19.94 | 6.59 | 50.41 | MT-TM-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 226.00 | 8.63 | 0.97 | 100.0 | MT-TC-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 50882.00 | 37.49 | 218.86 | 90.58 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 552.00 | 0.41 | 2.37 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 17178.00 | 12.66 | 73.89 | 75.01 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 243.00 | 0.18 | 1.05 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 49644.00 | 36.58 | 213.54 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 1558.00 | 1.15 | 6.70 | 100.0 | MT-TY-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 241.00 | 41.06 | 1.04 | 100.0 | MT-TD-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 14047.00 | 24.79 | 60.42 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 992.00 | 1.75 | 4.27 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 32235.00 | 56.88 | 138.66 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 339.00 | 0.60 | 1.46 | 100.0 | MT-TK-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 141.00 | 2.98 | 0.61 | 100.0 | MT-TS2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 127.00 | 2.69 | 0.55 | 100.0 | MT-TS2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 1000.00 | 21.16 | 4.30 | 92.76 | MT-TS2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 221.00 | 12.12 | 0.95 | 100.0 | MT-TL2-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_24_69_+ | 24–69 | 58.00 | 0.01 | 0.25 | 100.0 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_69_+ | 1–69 | 722693.00 | 85.43 | 3108.59 | 90.97 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_57_+ | 1–57 | 2635.00 | 0.31 | 11.33 | 100.0 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_13_67_+ | 13–67 | 269.00 | 0.03 | 1.16 | 100.0 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 5736.00 | 0.68 | 24.67 | 87.87 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 2150.00 | 0.25 | 9.25 | 81.41 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 491.00 | 0.06 | 2.11 | 20.44 | MT-TE-201 | Mt tRNA | stomach (Tissue) |
| ENST00000389680.2 | ENST00000389680.2_316_354_+ | 316–354 | 842.00 | 21.63 | 3.62 | 100.0 | MT-RNR1-201 | Mt rRNA | stomach (Tissue) |