ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 139.00 68.47 1.16 100.0 MIR378C-201 miRNA right lobe of liver (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 2121.00 72.91 17.69 81.48 MIR142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 14.00 0.48 0.12 100.0 MIR142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 129.00 4.43 1.08 14.27 MIR142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 90.62 0.02 0.76 48.72 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 83.17 0.02 0.69 52.98 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 360459.00 88.23 3006.55 93.64 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 45963.00 11.25 383.37 91.81 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 5000.00 6.10 41.70 83.71 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 15818.00 19.29 131.94 53.82 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 1260.00 1.54 10.51 100.0 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 53651.00 65.42 447.50 94.72 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 3332.00 4.06 27.79 84.53 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 8.00 20.00 0.07 33.33 ENST00000582320 lncRNA right lobe of liver (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 6.00 15.00 0.05 100.0 ENST00000582320 lncRNA right lobe of liver (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 8469.00 15.52 70.64 100.0 RPL17-214 retained intron right lobe of liver (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 29050.45 53.25 242.31 67.15 RPL17-214 retained intron right lobe of liver (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 12923.59 23.69 107.79 29.46 RPL17-214 retained intron right lobe of liver (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 754049.00 99.13 6289.44 99.93 SNORD43-201 snoRNA right lobe of liver (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 122.00 0.02 1.02 100.0 SNORD43-201 snoRNA right lobe of liver (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 24.00 26.09 0.20 100.0 MIR151B-201 miRNA right lobe of liver (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 98.00 1.55 0.82 100.0 SNORD3A-201 snoRNA right lobe of liver (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 1353.00 21.25 11.29 100.0 NSRP1-214 protein coding right lobe of liver (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 3726.00 58.52 31.08 83.73 NSRP1-214 protein coding right lobe of liver (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 325.00 11.19 2.71 94.2 MIR23AHG-201 lncRNA right lobe of liver (Tissue)