ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 29635.00 75.86 247.18 92.05 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 827.00 2.12 6.90 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 11.00 0.03 0.09 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 2905.00 7.44 24.23 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 1255.00 3.21 10.47 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 110.00 0.07 0.92 100.0 ENST00000563103 lncRNA right lobe of liver (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 12358.00 67.69 103.08 100.0 RPL4-207 retained intron right lobe of liver (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1454.00 7.96 12.13 100.0 RPL4-207 retained intron right lobe of liver (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 101261.00 81.50 844.61 93.56 ENST00000565336 lncRNA right lobe of liver (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 8076.00 6.50 67.36 63.45 ENST00000565336 lncRNA right lobe of liver (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2967.00 34.33 24.75 100.0 RBMX-210 retained intron right lobe of liver (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2504.00 28.97 20.89 100.0 RBMX-210 retained intron right lobe of liver (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 20.00 0.23 0.17 5.68 RBMX-210 retained intron right lobe of liver (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1044.00 53.32 8.71 100.0 RPL4-214 retained intron right lobe of liver (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6024.49 20.37 50.25 35.2 POLG-DT-202 lncRNA right lobe of liver (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 13504.40 45.67 112.64 76.59 POLG-DT-202 lncRNA right lobe of liver (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 285.00 0.96 2.38 100.0 POLG-DT-202 lncRNA right lobe of liver (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 763.00 10.36 6.36 100.0 ENST00000570843 lncRNA right lobe of liver (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 456.00 63.07 3.80 100.0 MIR497HG-207 lncRNA right lobe of liver (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 43488.00 97.74 362.73 98.29 MIR22HG-212 lncRNA right lobe of liver (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 712.00 50.86 5.94 59.23 SNORD53B-201 snoRNA right lobe of liver (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 490.00 35.00 4.09 40.77 SNORD53B-201 snoRNA right lobe of liver (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 19.00 12.67 0.16 100.0 ENST00000578036 lncRNA right lobe of liver (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 870.00 81.77 7.26 100.0 RPL23A-207 protein coding right lobe of liver (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 361.00 94.01 3.01 100.0 MIR744-201 miRNA right lobe of liver (Tissue)