ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 59.00 6.84 0.49 100.0 HCN2-201 protein coding right lobe of liver (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 13.00 0.82 0.11 100.0 ATP5MC3-201 protein coding right lobe of liver (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 1506.00 95.20 12.56 100.0 CDC25A-201 protein coding right lobe of liver (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 377.00 50.27 3.14 100.0 RUNX3-201 protein coding right lobe of liver (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 2781.00 85.12 23.20 100.0 BLOC1S4-201 protein coding right lobe of liver (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 148.00 27.16 1.23 100.0 ATAD5-201 protein coding right lobe of liver (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 304.00 11.00 2.54 100.0 SLITRK5-201 protein coding right lobe of liver (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 11.00 33.33 0.09 100.0 HASPIN-201 protein coding right lobe of liver (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 179.00 97.28 1.49 100.0 ATG101-201 protein coding right lobe of liver (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 63.00 52.07 0.53 100.0 PRICKLE1-201 protein coding right lobe of liver (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 6.00 100.00 0.05 100.0 MIR133A2-201 miRNA right lobe of liver (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 71.00 17.84 0.59 100.0 PBLD-204 protein coding right lobe of liver (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 130284.00 90.56 1086.69 98.55 MIRLET7BHG-201 lncRNA right lobe of liver (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 6870.00 4.78 57.30 84.91 MIRLET7BHG-201 lncRNA right lobe of liver (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 87.00 2.05 0.73 79.82 MIR375-201 miRNA right lobe of liver (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 4067.00 95.63 33.92 97.91 MIR375-201 miRNA right lobe of liver (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 3941.00 44.86 32.87 100.0 MIR30E-201 miRNA right lobe of liver (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 4310.00 49.06 35.95 100.0 MIR30E-201 miRNA right lobe of liver (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 296.00 46.39 2.47 100.0 MIR29A-201 miRNA right lobe of liver (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 105.00 88.98 0.88 100.0 MIR345-201 miRNA right lobe of liver (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 5234.00 98.36 43.66 100.0 MIR16-2-201 miRNA right lobe of liver (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1885.00 95.25 15.72 100.0 MIR340-201 miRNA right lobe of liver (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 13.00 0.66 0.11 100.0 MIR340-201 miRNA right lobe of liver (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1131.00 72.04 9.43 100.0 MIR107-201 miRNA right lobe of liver (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 139.00 92.05 1.16 92.05 MIR381-201 miRNA right lobe of liver (Tissue)