ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 2311.00 77.34 19.28 95.97 NOP56-217 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 1329.00 3.91 11.09 58.24 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 7026.00 20.68 58.60 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 7821.00 23.02 65.23 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 953.00 2.80 7.95 41.76 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 2696.00 7.94 22.49 87.82 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 434.00 1.28 3.62 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 5990.00 81.95 49.96 100.0 GNL3-211 retained intron right lobe of liver (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 893.00 12.22 7.45 100.0 GNL3-211 retained intron right lobe of liver (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 201.00 61.85 1.68 100.0 RPL5-205 retained intron right lobe of liver (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 290.00 1.61 2.42 100.0 ZBED9-AS1-201 lncRNA right lobe of liver (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 2293.00 89.50 19.13 100.0 RPS3A-206 retained intron right lobe of liver (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 24893.00 98.25 207.63 100.0 COX7C-203 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1304.00 1.99 10.88 100.0 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 37441.98 57.25 312.30 82.66 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 13390.00 20.47 111.68 99.81 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 7911.99 12.10 65.99 25.19 RACK1-229 protein coding right lobe of liver (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 474.00 11.57 3.95 100.0 RACK1-230 retained intron right lobe of liver (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 327.00 1.33 2.73 100.0 RNA5SP486-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 8401.00 92.16 70.07 100.0 SCARNA5-201 scaRNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 1755.00 2.82 14.64 80.21 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1062.00 1.71 8.86 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4984.00 8.00 41.57 76.43 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 1098.00 1.76 9.16 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 88.00 0.14 0.73 9.27 RNY4-201 misc RNA right lobe of liver (Tissue)