ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 167.00 79.52 0.83 82.67 MIR3142HG-201 lncRNA uterus (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 10704.00 77.94 53.40 89.3 MIR151A-201 miRNA uterus (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 1507.00 10.97 7.52 100.0 MIR151A-201 miRNA uterus (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 663.00 99.25 3.31 100.0 DENND3-221 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 788.00 6.73 3.93 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 426.00 3.64 2.13 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 274.00 2.34 1.37 62.99 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 85.00 0.73 0.42 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 161.00 1.38 0.80 37.01 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 676.00 5.78 3.37 65.82 WDR74-204 protein coding uterus (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 151.00 14.83 0.75 100.0 SCARNA9-201 lncRNA uterus (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 23824.00 96.92 118.86 100.0 TAF1D-215 retained intron uterus (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 116863.00 73.58 583.04 75.89 ENST00000548801 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 201.00 5.70 1.00 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 830.00 23.55 4.14 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 184.00 0.74 0.92 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 22964.00 91.79 114.57 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 119.00 0.48 0.59 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 616.00 2.46 3.07 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 561.00 98.08 2.80 100.0 TEKT4P2-201 transcribed unprocessed pseudogene uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 462.00 1.43 2.30 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 3731.00 11.51 18.61 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 8.00 0.02 0.04 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 717.00 2.21 3.58 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 23390.00 72.16 116.69 91.65 RPL4-202 retained intron uterus (Tissue)