ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 600.00 13.12 2.99 100.0 GNL3-211 retained intron uterus (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 3637.00 79.55 18.15 100.0 GNL3-211 retained intron uterus (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 110.00 46.61 0.55 100.0 RPL5-205 retained intron uterus (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 40.00 1.61 0.20 100.0 ZBED9-AS1-201 lncRNA uterus (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 2358.00 92.04 11.76 100.0 RPS3A-206 retained intron uterus (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 9101.00 97.98 45.41 100.0 COX7C-203 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 4262.14 13.43 21.26 38.09 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 11139.87 35.11 55.58 74.91 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 2657.00 8.37 13.26 100.0 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 11033.00 34.78 55.04 99.74 RACK1-229 protein coding uterus (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 4.00 0.35 0.02 30.77 RACK1-230 retained intron uterus (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 77.00 6.69 0.38 95.06 RACK1-230 retained intron uterus (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 65.00 2.93 0.32 100.0 RNA5SP486-201 rRNA pseudogene uterus (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 2512.00 88.73 12.53 100.0 SCARNA5-201 scaRNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 30.00 0.01 0.15 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 54881.00 13.63 273.80 62.06 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 157099.00 39.01 783.78 99.78 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 787.00 0.20 3.93 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1088.00 0.27 5.43 54.02 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 3808.00 0.95 19.00 70.27 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 276.00 0.07 1.38 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 137979.00 34.26 688.39 80.44 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 176.00 0.04 0.88 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 145.00 0.04 0.72 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 101.00 0.03 0.50 51.79 RNY4-201 misc RNA uterus (Tissue)