ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 3115.00 50.87 15.54 100.0 RPL4-207 retained intron uterus (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1124.00 18.35 5.61 100.0 RPL4-207 retained intron uterus (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 4759.00 78.64 23.74 95.14 ENST00000565336 lncRNA uterus (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 467.00 7.72 2.33 68.88 ENST00000565336 lncRNA uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3588.00 24.63 17.90 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 4369.00 29.99 21.80 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 101.00 0.69 0.50 7.89 RBMX-210 retained intron uterus (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 53.00 19.27 0.26 100.0 RPL4-214 retained intron uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 1425.69 21.76 7.11 35.53 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 2826.98 43.14 14.10 75.81 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 102.00 1.56 0.51 100.0 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 165.00 14.97 0.82 100.0 ENST00000570843 lncRNA uterus (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 998.00 72.21 4.98 100.0 MIR497HG-207 lncRNA uterus (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 4818.00 96.44 24.04 97.04 MIR22HG-212 lncRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 409.00 46.90 2.04 52.5 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 4.00 0.46 0.02 100.0 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 370.00 42.43 1.85 47.5 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 20.00 64.52 0.10 100.0 ENST00000578036 lncRNA uterus (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 532.00 91.57 2.65 100.0 RPL23A-207 protein coding uterus (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 80.00 87.91 0.40 100.0 MIR744-201 miRNA uterus (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 31.00 68.89 0.15 100.0 MIR378C-201 miRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 290.00 74.17 1.45 82.86 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 5.00 1.28 0.02 4.24 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 1294.44 0.05 6.46 65.38 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 615.92 0.03 3.07 42.04 RPL23A-208 retained intron uterus (Tissue)