ENCFF546NNZ

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR887HNW
Description: Part of ENCODE experiment ENCSR887HNW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's uterus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 14.00 4.86 0.07 100.0 HCN2-201 protein coding uterus (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 2.00 15.38 0.01 100.0 SLC49A4-201 protein coding uterus (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 17.00 8.99 0.08 100.0 ATP5MC3-201 protein coding uterus (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 171.00 78.08 0.85 100.0 CDC25A-201 protein coding uterus (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 3565.00 95.45 17.79 100.0 RUNX3-201 protein coding uterus (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 15.00 10.42 0.07 100.0 BLOC1S4-201 protein coding uterus (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 162.00 25.16 0.81 100.0 ATAD5-201 protein coding uterus (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 29.00 16.48 0.14 100.0 SLITRK5-201 protein coding uterus (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 5.00 35.71 0.02 100.0 HASPIN-201 protein coding uterus (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 83.00 100.00 0.41 100.0 ATG101-201 protein coding uterus (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 2.00 28.57 0.01 100.0 PRICKLE1-201 protein coding uterus (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 108.00 98.18 0.54 100.0 MIR133A2-201 miRNA uterus (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 1.00 12.50 0.00 100.0 PBLD-204 protein coding uterus (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 208389.00 89.36 1039.67 97.22 MIRLET7BHG-201 lncRNA uterus (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 11856.00 5.08 59.15 82.08 MIRLET7BHG-201 lncRNA uterus (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 22.00 100.00 0.11 100.0 MIR375-201 miRNA uterus (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 1171.00 61.53 5.84 100.0 MIR30E-201 miRNA uterus (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 603.00 31.69 3.01 100.0 MIR30E-201 miRNA uterus (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 104.00 46.02 0.52 100.0 MIR29A-201 miRNA uterus (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 19.00 79.17 0.09 100.0 MIR345-201 miRNA uterus (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 2098.00 99.01 10.47 100.0 MIR16-2-201 miRNA uterus (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 282.00 97.24 1.41 100.0 MIR340-201 miRNA uterus (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 152.00 56.93 0.76 100.0 MIR107-201 miRNA uterus (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 82.00 86.32 0.41 89.13 MIR381-201 miRNA uterus (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 1109.00 83.45 5.53 91.8 MIR103A2-201 miRNA uterus (Tissue)