ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 25.00 33.33 0.10 100.0 MIR34BHG-202 lncRNA spleen (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 4147.00 65.27 17.19 73.22 THBS3-AS1-228 lncRNA spleen (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 37.00 72.55 0.15 100.0 MIR200CHG-202 lncRNA spleen (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 5.00 9.80 0.02 100.0 MIR200CHG-202 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 5725.00 42.16 23.72 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 397.00 2.92 1.65 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 1374.00 10.12 5.69 100.0 SNHG16-266 lncRNA spleen (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 11.00 39.29 0.05 100.0 MEG8-261 lncRNA spleen (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 78.00 21.31 0.32 100.0 NR2F2-AS1-327 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 1125.00 8.32 4.66 46.66 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 5582.00 41.27 23.13 100.0 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 782.00 5.78 3.24 41.01 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 504.00 3.73 2.09 30.94 ENST00000747675 lncRNA spleen (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 1147.00 8.48 4.75 100.0 ENST00000747675 lncRNA spleen (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 51419.00 80.70 213.09 93.21 SNHG26-250 lncRNA spleen (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 964.00 1.51 3.99 100.0 SNHG26-250 lncRNA spleen (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 872.00 27.49 3.61 100.0 LINC02422-207 lncRNA spleen (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 63.00 2.81 0.26 100.0 ENST00000753088 lncRNA spleen (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 751.00 33.48 3.11 100.0 ENST00000753088 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1264.77 4.11 5.24 14.49 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 510.00 1.66 2.11 100.0 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 330.00 1.07 1.37 100.0 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 193.00 0.63 0.80 100.0 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 6912.99 22.45 28.65 52.29 ENST00000756336 lncRNA spleen (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 7787.75 25.29 32.27 58.38 ENST00000756336 lncRNA spleen (Tissue)