ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1647.00 4.51 6.83 49.94 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 91.00 0.25 0.38 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 20.00 0.05 0.08 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 8.00 0.02 0.03 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 43.00 0.12 0.18 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 8182.00 22.39 33.91 72.2 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 110.00 0.30 0.46 100.0 ENST00000651540 lncRNA spleen (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 10710.00 29.30 44.38 81.08 ENST00000651540 lncRNA spleen (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 3959.00 0.59 16.41 100.0 MIRLET7A1HG-203 lncRNA spleen (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 527.00 84.19 2.18 100.0 MEG8-225 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 6093.00 45.24 25.25 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 3139.00 23.31 13.01 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1719.00 12.76 7.12 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 7.00 0.05 0.03 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 5.00 0.04 0.02 100.0 SNHG29-232 lncRNA spleen (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 90.00 3.78 0.37 100.0 SNHG14-234 lncRNA spleen (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 58.00 2.44 0.24 100.0 SNHG14-234 lncRNA spleen (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 358.00 1.63 1.48 100.0 ENST00000655317 lncRNA spleen (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 18673.00 84.82 77.38 94.61 ENST00000655317 lncRNA spleen (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2576.00 0.55 10.68 86.13 LINC01962-202 lncRNA spleen (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 462743.00 98.60 1917.65 100.0 LINC01962-202 lncRNA spleen (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 390.00 0.08 1.62 100.0 LINC01962-202 lncRNA spleen (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 2794.00 89.12 11.58 100.0 MEG8-228 lncRNA spleen (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 2800.00 26.87 11.60 100.0 LIMD1-AS1-204 lncRNA spleen (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1931.00 18.53 8.00 97.04 LIMD1-AS1-204 lncRNA spleen (Tissue)