ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1020.00 17.84 4.23 100.0 ENST00000554988 lncRNA spleen (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 274.00 0.47 1.14 100.0 SNHG14-220 retained intron spleen (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 343.00 0.59 1.42 100.0 SNHG14-220 retained intron spleen (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 36.00 0.06 0.15 100.0 SNHG14-220 retained intron spleen (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 55639.00 95.35 230.57 100.0 SNHG14-220 retained intron spleen (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 4044.00 99.29 16.76 100.0 TEKT4P2-201 transcribed unprocessed pseudogene spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 26851.00 76.47 111.27 91.78 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 1174.00 3.34 4.87 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 18.00 0.05 0.07 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 1069.00 3.04 4.43 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 825.00 2.35 3.42 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 350.00 0.19 1.45 100.0 ENST00000563103 lncRNA spleen (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 6718.00 40.85 27.84 100.0 RPL4-207 retained intron spleen (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 2272.00 13.81 9.42 100.0 RPL4-207 retained intron spleen (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 67257.00 83.33 278.72 96.53 ENST00000565336 lncRNA spleen (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 5770.00 7.15 23.91 62.61 ENST00000565336 lncRNA spleen (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 9315.00 30.55 38.60 100.0 RBMX-210 retained intron spleen (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 8390.00 27.51 34.77 100.0 RBMX-210 retained intron spleen (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 171.00 0.56 0.71 15.45 RBMX-210 retained intron spleen (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1158.00 46.45 4.80 100.0 RPL4-214 retained intron spleen (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6069.36 27.07 25.15 42.87 POLG-DT-202 lncRNA spleen (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 9993.42 44.57 41.41 74.36 POLG-DT-202 lncRNA spleen (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 683.00 3.05 2.83 100.0 POLG-DT-202 lncRNA spleen (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 995.00 43.00 4.12 100.0 ENST00000570843 lncRNA spleen (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 2289.00 83.57 9.49 100.0 MIR497HG-207 lncRNA spleen (Tissue)