ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2379.00 32.95 1.99 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 900.00 0.39 0.75 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 13816.00 6.01 11.57 84.67 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 123.00 0.05 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 4856.00 2.11 4.07 85.46 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 31049.00 13.51 26.01 49.33 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 415.00 0.18 0.35 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 219.00 0.10 0.18 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 116.00 32.04 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 47350.00 6.11 39.67 96.44 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 5224.00 73.87 4.38 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 89.00 1.26 0.07 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 2511.00 39.39 2.10 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 953.00 4.45 0.80 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 1328.00 0.17 1.11 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 4915.00 0.63 4.12 35.94 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1242.00 24.33 1.04 77.77 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 529.00 10.36 0.44 29.87 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 979.00 4.59 0.82 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 141724.00 62.09 118.73 93.55 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2458.00 1.08 2.06 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 2413.00 26.61 2.02 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 62.00 4.78 0.05 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 1203.00 1.55 1.01 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 101.00 0.46 0.08 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)