ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 362.00 1.64 0.30 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 110.00 0.50 0.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 348.00 1.58 0.29 51.48 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 476.00 2.16 0.40 76.65 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 118.00 0.54 0.10 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 7078.00 26.05 5.93 59.41 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 6116.00 22.51 5.12 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 3357.00 14.12 2.81 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 41.00 0.14 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 25.00 0.08 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 533.00 1.81 0.45 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 22650.00 76.78 18.98 90.38 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 887.00 3.01 0.74 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1991.00 9.30 1.67 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 13443.00 66.89 11.26 88.77 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 441.00 2.39 0.37 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 1080.00 24.94 0.90 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 142.00 3.28 0.12 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 45.00 1.04 0.04 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 970.00 22.40 0.81 91.25 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 733.00 0.09 0.61 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 352.00 35.02 0.29 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 624.00 23.15 0.52 53.33 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 206.00 7.64 0.17 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 546.00 20.25 0.46 46.67 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA hepatocyte (In vitro differentiated cells)