ENCFF518LYU

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 20.00 0.28 0.02 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 4835.00 17.83 4.05 59.69 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 417.00 0.04 0.35 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1226.00 0.53 1.03 91.84 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 924.00 42.74 0.77 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 1976.00 19.90 1.66 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1106797.00 99.00 927.23 99.89 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 129.00 0.23 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 11349.00 20.33 9.51 70.19 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 968.00 63.73 0.81 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 256.00 18.42 0.21 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 1211.00 41.98 1.01 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 202025.00 98.08 169.25 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 7206.00 86.61 6.04 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 46584.00 60.38 39.03 95.46 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 162.00 0.21 0.14 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 704.00 0.06 0.59 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1424.00 7.40 1.19 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 434.00 6.01 0.36 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 2053.00 15.00 1.72 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 1355.00 9.90 1.14 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 189.00 1.38 0.16 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 6959.00 94.38 5.83 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA hepatocyte (In vitro differentiated cells)