ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 13816.00 39.75 54.61 96.23 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 4704.00 13.53 18.59 100.0 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 541.00 1.56 2.14 19.67 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 8.00 0.26 0.03 61.54 ENST00000788343 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3118.32 30.23 12.33 44.18 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2802.44 27.17 11.08 39.7 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 816.00 7.91 3.23 87.09 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 31921.00 82.32 126.18 92.92 MIR181A1HG-212 lncRNA esophagus squamous epithelium (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 46.00 0.12 0.18 100.0 MIR181A1HG-212 lncRNA esophagus squamous epithelium (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 512.00 29.31 2.02 100.0 C19orf48P-218 lncRNA esophagus squamous epithelium (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 786.00 44.99 3.11 100.0 C19orf48P-218 lncRNA esophagus squamous epithelium (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1771.00 54.90 7.00 89.81 SNHG18-220 lncRNA esophagus squamous epithelium (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 311.00 5.35 1.23 100.0 ENST00000817026 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 169.91 0.76 0.67 60.04 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 28.00 0.13 0.11 100.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 620.00 2.78 2.45 63.65 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 47.00 0.21 0.19 100.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 1494.00 6.71 5.91 99.53 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 374.04 1.68 1.48 31.81 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 176.44 0.79 0.70 31.62 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 273.00 1.23 1.08 69.82 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 107.03 0.48 0.42 25.24 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 414.82 1.86 1.64 65.12 ENST00000823801 lncRNA esophagus squamous epithelium (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 773.00 67.28 3.06 80.94 ENST00000827714 lncRNA esophagus squamous epithelium (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 182.00 15.84 0.72 19.06 ENST00000827714 lncRNA esophagus squamous epithelium (Tissue)