ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 3724.00 58.94 14.72 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 624.00 9.88 2.47 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 175.00 2.77 0.69 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 1405.00 9.97 5.55 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 59.00 0.42 0.23 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 3080.00 21.86 12.18 83.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 605.00 4.29 2.39 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 72.00 7.79 0.28 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 26.00 2.81 0.10 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 682.00 26.48 2.70 100.0 ENST00000773843 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 25.00 0.00 0.10 100.0 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 395745.00 51.51 1564.36 91.29 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 369873.00 48.15 1462.09 97.8 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 14404.00 1.35 56.94 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 930946.00 87.56 3679.99 92.24 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 217.00 0.02 0.86 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 898.71 0.08 3.55 36.36 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 4319.50 0.41 17.07 56.9 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 2515.00 0.24 9.94 28.5 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5554.00 0.52 21.95 95.59 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 477.00 0.04 1.89 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 18.00 0.77 0.07 100.0 ENST00000778783 lncRNA esophagus squamous epithelium (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1056.00 83.41 4.17 87.49 MIR155HG-205 lncRNA esophagus squamous epithelium (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 5.00 62.50 0.02 100.0 ENST00000784740 lncRNA esophagus squamous epithelium (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 5.00 0.03 0.02 100.0 ENST00000785178 lncRNA esophagus squamous epithelium (Tissue)