ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 235554.00 94.35 931.14 99.53 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 206.00 2.86 0.81 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1558.00 8.31 6.16 63.67 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 1057.00 0.28 4.18 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 445.00 0.07 1.76 43.41 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2855.00 57.09 11.29 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 228.00 1.23 0.90 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 381456.00 96.34 1507.88 99.69 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 92.00 0.04 0.36 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 152267.00 70.52 601.91 94.13 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 158.00 6.10 0.62 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 1353.00 22.63 5.35 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 222.00 5.90 0.88 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 30003.00 86.11 118.60 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 2571.00 94.77 10.16 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 9673.00 9.54 38.24 92.88 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 93.00 0.09 0.37 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 11.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 6351.00 50.57 25.11 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 25.00 0.14 0.10 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 457.00 13.20 1.81 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 104.00 3.00 0.41 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 70.00 2.02 0.28 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 2.00 3.17 0.01 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA esophagus squamous epithelium (Tissue)