ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 12652.00 7.79 50.01 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 39.00 0.02 0.15 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1383.00 0.85 5.47 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 145371.00 89.50 574.65 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 19399.00 91.54 76.68 100.0 MIR205HG-245 lncRNA esophagus squamous epithelium (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 2.00 0.15 0.01 100.0 TAF12-DT-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 155996.00 95.08 616.65 99.78 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 73.00 0.04 0.29 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 59.00 0.04 0.23 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2882.00 1.76 11.39 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 20412.00 86.81 80.69 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 1857.00 7.90 7.34 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1838.00 63.69 7.27 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 401.00 13.89 1.59 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2104.00 70.79 8.32 78.89 ENST00000839036 lncRNA esophagus squamous epithelium (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 167.00 11.15 0.66 100.0 ENST00000849527 lncRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 73244.00 81.63 289.53 98.57 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 88.00 0.10 0.35 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 69.00 0.02 0.27 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 520.00 13.71 2.06 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 316.00 8.33 1.25 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 77.00 4.00 0.30 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 274.00 0.80 1.08 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1510.00 38.66 5.97 70.59 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 1571.00 0.40 6.21 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus squamous epithelium (Tissue)