ENCFF510IHL

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR779BVZ
Description: Part of ENCODE experiment ENCSR779BVZ. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1269.00 89.75 5.02 100.0 SCARNA5-201 scaRNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 173.00 0.08 0.68 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 116.00 0.05 0.46 46.22 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 27699.00 13.02 109.49 60.94 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 2444.00 1.15 9.66 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 13786.00 6.48 54.50 51.42 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 173.00 0.08 0.68 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 153.00 0.07 0.60 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 184.00 0.09 0.73 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 83182.00 39.09 328.82 82.41 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 35523.00 16.69 140.42 99.27 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 190.00 0.09 0.75 100.0 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1231.00 0.58 4.87 67.94 RNY4-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 3362.00 80.33 13.29 88.66 MIR3142HG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 1529.00 82.65 6.04 100.0 SNHG6-204 retained intron esophagus squamous epithelium (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 19909.00 78.13 78.70 90.05 MIR151A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 2954.00 11.59 11.68 100.0 MIR151A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2874.00 99.38 11.36 100.0 DENND3-221 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 161.00 0.91 0.64 100.0 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 146.00 0.83 0.58 100.0 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 426.00 2.41 1.68 59.08 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 64.00 0.36 0.25 100.0 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 116.00 0.66 0.46 42.03 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 735.00 4.16 2.91 63.36 WDR74-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 160.00 0.91 0.63 57.97 WDR74-204 protein coding esophagus squamous epithelium (Tissue)