ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 3589.00 51.57 7.15 100.0 ENST00000760093 lncRNA Peyer's patch (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 1012.00 14.54 2.02 100.0 ENST00000760093 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 159195.00 77.33 316.98 85.04 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 33385.00 16.22 66.47 87.56 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 7.00 0.00 0.01 100.0 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1628.00 98.55 3.24 100.0 EHBP1-AS1-210 lncRNA Peyer's patch (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 3622.00 45.11 7.21 100.0 ENST00000770398 lncRNA Peyer's patch (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 457.00 5.69 0.91 100.0 ENST00000770398 lncRNA Peyer's patch (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 347.00 4.32 0.69 100.0 ENST00000770398 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 179.00 0.61 0.36 100.0 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 157.00 0.53 0.31 100.0 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 1727.00 5.87 3.44 100.0 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 22935.00 77.94 45.67 90.98 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 29.00 1.56 0.06 100.0 ENST00000772672 lncRNA Peyer's patch (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 107.00 14.32 0.21 100.0 ENST00000773843 lncRNA Peyer's patch (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 204063.00 30.33 406.31 84.02 SNHG12-223 lncRNA Peyer's patch (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 464999.00 69.12 925.87 98.97 SNHG12-223 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 537.00 0.86 1.07 100.0 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 27927.00 44.84 55.61 100.0 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 173.00 0.28 0.34 56.35 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 564.00 0.91 1.12 100.0 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 1571.65 2.52 3.13 51.73 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1546.22 2.48 3.08 55.48 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 2129.84 3.42 4.24 43.07 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 14328.00 23.01 28.53 93.21 SNHG25-206 lncRNA Peyer's patch (Tissue)