ENCFF495VAK

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR718AXQ
Description: Part of ENCODE experiment ENCSR718AXQ. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2451.00 83.40 4.88 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 20.00 0.86 0.04 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 2901761.00 99.66 5777.74 99.85 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 114.00 0.29 0.23 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 24172.00 61.43 48.13 79.12 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1186.00 83.00 2.36 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 458.00 34.44 0.91 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 1278.00 43.86 2.54 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 173134.00 98.94 344.73 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 17041.00 98.51 33.93 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 4399.00 35.95 8.76 73.04 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 86.00 0.70 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 8.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 778.00 48.84 1.55 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 49.00 1.59 0.10 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 76.00 1.72 0.15 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 154.00 3.49 0.31 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA Peyer's patch (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 860.00 19.49 1.71 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA Peyer's patch (Tissue)